Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1833Homologs of previously reported genes of unknown function. (202 aa)    
Predicted Functional Partners:
flgM
Putative negative regulator of flagellin synthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 
  
 0.871
PSHAa0817
Homologs of previously reported genes of unknown function.
 
  
 0.865
fliS
Putative flagellar biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
  
 0.833
cheZ
Chemotaxis protein cheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
    0.827
PSHAa1210
Putative response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 
  
 0.821
PSHAa2312
Putative orphan protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.802
fliD
Putative flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.794
flgK
Putative flagellar hook-associated; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.787
fliL
Putative flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.780
fliJ
Flagellar protein; Function of strongly homologous gene; structural protein.
 
    0.776
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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