STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1847Cation transport ATPase, E1-E2 family; Function of homologous gene experimentally demonstrated in an other organism; transporter. (791 aa)    
Predicted Functional Partners:
PSHAa1846
Homologs of previously reported genes of unknown function.
 
  
 0.941
PSHAa1843
Putative Cbb3-type cytochrome oxidase, cytochrome c subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
 
   
 0.934
PSHAa1849
Homologs of previously reported genes of unknown function.
 
   
 0.930
PSHAa1842
Cytochrome c oxidase, cbb3-type, subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.929
PSHAa1845
Putative cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.874
PSHAa1844
Putative Cbb3-type cytochrome oxidase, subunit 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
   
 0.810
fnr
Transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family); Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.755
PSHAa1848
Putative cytochrome oxidase maturation protein, cbb3-type (partial match); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.753
uspE
Putative universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
     
 0.705
PSHAa0246
Homologs of previously reported genes of unknown function; carrier.
 
  
 0.698
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.