Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phoDPutative alkaline phosphatase D (APaseD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (347 aa)    
Predicted Functional Partners:
PSHAa2976
Alkaline phosphatase; Function of strongly homologous gene; enzyme; Belongs to the alkaline phosphatase family.
  
 
 0.935
PSHAa2977
Secreted alkaline phosphatase; Function of strongly homologous gene; enzyme; Belongs to the alkaline phosphatase family.
  
 
 0.935
PSHAb0500
Putative alkaline phosphatase; Function of strongly homologous gene; enzyme; Belongs to the alkaline phosphatase family.
  
 
 0.935
folE
GTP cyclohydrolase I; Function of strongly homologous gene; enzyme.
    
 0.911
folX
D-erythro-7,8-dihydroneopterin aldolase; Function of strongly homologous gene; enzyme.
     
 0.902
folB
Dihydroneopterin aldolase (DHNA); Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.902
folE2
Conserved protein of unknown function; Converts GTP to 7,8-dihydroneopterin triphosphate.
     
  0.900
PSHAa1861
Putative orphan protein; No homology to any previously reported sequences.
 
     0.837
PSHAa1862
Putative TonB-dependent receptor; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
     0.805
phoR
Phosphate regulon sensor protein phoR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
      
 0.676
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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