Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1879Putative Lipoprotein releasing system ATP-binding component of ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. (237 aa)    
Predicted Functional Partners:
PSHAa1878
Homologs of previously reported genes of unknown function.
 
 
 
 0.983
apeA
Multifunctional: Acyl-CoA thioesterase I (Protease I) (Lysophospholipase L1) (Lecithinase B); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
   0.965
PSHAa2828
Putative ABC transporter, permease protein; Function of strongly homologous gene; transporter.
     0.940
fhuC
Putative Iron-compound ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
    
0.920
sapC
Peptide transport protein (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
      0.898
rplL
50S ribosomal subunit protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.832
PSHAa2841
ABC-type multidrug transport system, ATPase and permease component; Function of strongly homologous gene; transporter.
 
    
0.788
PSHAa2550
Putative transport protein (ABC superfamily, atp-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
    
0.706
PSHAa1626
Sodium ABC exporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
   
0.641
rpsE
30S ribosomal subunit protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
     0.566
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.