Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1888Putative cyanophycinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (547 aa)    
Predicted Functional Partners:
hutG
Formiminoglutamate hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the arginase family.
  
     0.512
PSHAa2367
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
     0.477
PSHAa2535
Homologs of previously reported genes of unknown function.
  
     0.474
PSHAa1344
Homologs of previously reported genes of unknown function.
  
     0.471
PSHAa1889
Putative orphan protein; No homology to any previously reported sequences.
       0.467
PSHAa0988
Homologs of previously reported genes of unknown function.
  
     0.443
PSHAa2430
Putative orphan protein; No homology to any previously reported sequences.
  
     0.442
PSHAa2249
Putative DNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.429
seqA
SeqA protein, recognizes hemimethylated GATC motifs; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
     0.427
PSHAa0083
Homologs of previously reported genes of unknown function; membrane component.
  
     0.426
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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