STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1994Putative orphan protein; No homology to any previously reported sequences. (91 aa)    
Predicted Functional Partners:
PSHAa2312
Putative orphan protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.746
dinG
Putative ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase.
       0.736
PSHAa1992
Conserved protein of unknown functions similar to YfcA; Homologs of previously reported genes of unknown function.
       0.736
PSHAa1993
Homologs of previously reported genes of unknown function.
       0.736
PSHAa1962
Homologs of previously reported genes of unknown function.
  
     0.725
PSHAa0817
Homologs of previously reported genes of unknown function.
  
     0.703
PSHAa1990
DNA polymerase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.680
PSHAa2855
Homologs of previously reported genes of unknown function.
  
     0.679
PSHAa0761
Homologs of previously reported genes of unknown function.
  
     0.660
PSHAa0762
Homologs of previously reported genes of unknown function.
  
     0.637
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.