Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cydDCysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Function of homologous gene experimentally demonstrated in an other organism; regulator. (564 aa)    
Predicted Functional Partners:
cydC
Cysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
0.999
cydB
Cytochrome d terminal oxidase, polypeptide subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.991
cydA
Cytochrome d terminal oxidase, polypeptide subunit I; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.990
fhuC
Putative Iron-compound ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
    
0.918
pstB
Phosphate import ATP-binding protein pstB(Phosphate-transporting ATPase)(ABC phosphate transporter); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
PSHAa2020
Homologs of previously reported genes of unknown function.
  
  
 0.846
fbpC
Iron(III) ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
    
0.782
PSHAa1879
Putative Lipoprotein releasing system ATP-binding component of ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
    
0.504
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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