Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cydCCysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Function of homologous gene experimentally demonstrated in an other organism; regulator. (579 aa)    
Predicted Functional Partners:
cydD
Cysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
0.999
cydB
Cytochrome d terminal oxidase, polypeptide subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.988
cydA
Cytochrome d terminal oxidase, polypeptide subunit I; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.970
fhuC
Putative Iron-compound ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
   
0.906
pstB
Phosphate import ATP-binding protein pstB(Phosphate-transporting ATPase)(ABC phosphate transporter); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
PSHAa2020
Homologs of previously reported genes of unknown function.
  
  
 0.844
cysK
O-acetylserine sulfhydrylase, PLP-dependent enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.822
rpoS
Sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
      
 0.515
glk
Putative glucokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the bacterial glucokinase family.
      
 0.513
dnaK
Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
     0.439
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.