STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PSHAa2134Putative AMP-binding enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (564 aa)    
Predicted Functional Partners:
PSHAa2135
Putative metallo-dependent enzymatic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.838
PSHAa2136
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
   
 0.749
tesH
3-ketosteroid-delta1-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.720
PSHAa2132
Putative AMP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
    
0.669
PSHAa2130
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.635
PSHAa2137
Putative protein with ferredoxin subunits; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
  
 0.621
PSHAa2131
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.609
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
      0.601
PSHAa0898
Putative acyl dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.585
rpsQ
30S ribosomal subunit protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.548
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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