STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2136Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. (466 aa)    
Predicted Functional Partners:
PSHAa2137
Putative protein with ferredoxin subunits; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
   
 0.897
PSHAa2134
Putative AMP-binding enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.749
PSHAa2135
Putative metallo-dependent enzymatic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.632
PSHAa0898
Putative acyl dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.618
tesH
3-ketosteroid-delta1-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.608
teiR
LuxR-type transcription regulator required for testosterone degradation; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
     0.573
PSHAa0896
Putative very-long-chain acyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.557
PSHAa2132
Putative AMP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
   
 0.554
PSHAa0897
Putative nonspecific lipid-transfer protein; Homologs of previously reported genes of unknown function.
  
   
 0.550
PSHAa2138
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.473
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.