STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa2137Putative protein with ferredoxin subunits; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (364 aa)    
Predicted Functional Partners:
tesH
3-ketosteroid-delta1-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.984
PSHAa0878
Putative reductase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
 
 0.968
PSHAa2136
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
   
 0.897
tesB-2
Putative dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.783
PSHAa0902
Putative acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.777
PSHAa0877
Putative steroid degradation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
   
 0.774
teiR
LuxR-type transcription regulator required for testosterone degradation; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
     0.774
PSHAa0901
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; Function of strongly homologous gene; enzyme.
 
   
 0.767
PSHAa0884
Homologs of previously reported genes of unknown function.
 
    0.764
tesD
Putative hydrolase acting on oxygenated substrates (epoxide hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 
 0.764
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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