STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2185Putative amidohydrolase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (475 aa)    
Predicted Functional Partners:
PSHAa0464
Homologs of previously reported genes of unknown function.
  
     0.737
PSHAa2859
Homologs of previously reported genes of unknown function.
  
     0.672
PSHAb0171
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.655
PSHAb0063
Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.629
PSHAa1696
Leucine aminopeptidase-related protein; Function of strongly homologous gene; enzyme.
  
     0.604
PSHAa0866
Putative orphan protein; No homology to any previously reported sequences.
  
     0.567
PSHAa1729
Homologs of previously reported genes of unknown function.
  
     0.554
PSHAb0189
Homologs of previously reported genes of unknown function.
  
     0.551
PSHAa2924
Homologs of previously reported genes of unknown function.
 
    0.534
madN
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.533
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.