STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baeRTranscriptional regulatory protein in two-component regulatory system with baeS; Function of homologous gene experimentally demonstrated in an other organism; regulator. (226 aa)    
Predicted Functional Partners:
baeS
Putative sensory transduction histidine kinase in two-component regulatory system with baeR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 0.997
PSHAb0289
Putative two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 
 
 0.978
PSHAa0654
Homologs of previously reported genes of unknown function.
 
 0.949
arcB
Aerobic respiration control sensor protein arcB; Function of strongly homologous gene; regulator.
 
 0.937
PSHAa0077
Putative sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 
 
 0.928
phoR
Phosphate regulon sensor protein phoR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.927
rstB
Sensory histidine kinase in two-component regulatory system with RstA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.922
PSHAa2919
Putative control sensor/kinase protein (ArcB, TorS, ChiS, LuxQ, BvgS family); Function of strongly homologous gene; receptor.
 
 
 0.884
PSHAa0111
Putative membrane bound sensor or esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
 0.882
barA
Sensor protein barA; Function of strongly homologous gene; regulator.
 
 0.881
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.