STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2209Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (237 aa)    
Predicted Functional Partners:
PSHAb0231
Mercuric reductase (Hg(II) reductase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
     0.692
PSHAb0228
Putative ABC-type transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
     0.666
PSHAb0232
Putative TonB dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 
     0.641
PSHAb0226
Putative CDP-alcohol phosphatidyltransferase or Phosphatidylglycerophosphate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.637
gltB
Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.586
PSHAa2210
Putative orphan protein; No homology to any previously reported sequences.
       0.551
PSHAa2211
Homologs of previously reported genes of unknown function.
       0.547
PSHAb0229
Putative ABC-type transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
     0.544
mtD
Mannitol dehydrogenase (NAD-dependent mannitol dehydrogenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.485
PSHAb0018
Putative Zn-dependent enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.484
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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