Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cyoEProtoheme IX farnesyltransferase (Heme O synthase); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (294 aa)    
Predicted Functional Partners:
cyoD
Cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.991
cyoA
Ubiquinol oxidase subunit 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.991
cyoC
Cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.988
cyoB
Cytochrome o ubiquinol oxidase subunit I; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.988
PSHAa2866
Putative Cytochrome oxidase assembly protein; Function of strongly homologous gene; membrane component.
  
 0.974
PSHAa2870
Cytochrome c oxidase assembly protein coxG; Function of strongly homologous gene; membrane component.
  
 0.967
ctaD
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 
 0.929
cyoE2
Polyprenyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
 
0.921
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.911
PSHAa2869
Cytochrome c oxidase subunit III; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
 
  
 0.862
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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