Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
asnC | gltB | PSHAa2797 | PSHAb0127 | Transcriptional regulator of asparagine biosynthesis (AsnC family); Function of homologous gene experimentally demonstrated in an other organism; regulator. | Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.409 |
asnC | lrp-2 | PSHAa2797 | PSHAa2263 | Transcriptional regulator of asparagine biosynthesis (AsnC family); Function of homologous gene experimentally demonstrated in an other organism; regulator. | Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.774 |
gltB | asnC | PSHAb0127 | PSHAa2797 | Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Transcriptional regulator of asparagine biosynthesis (AsnC family); Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.409 |
gltB | lrp-2 | PSHAb0127 | PSHAa2263 | Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.409 |
gltB | putA | PSHAb0127 | PSHAa2264 | Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.936 |
lrp-2 | asnC | PSHAa2263 | PSHAa2797 | Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | Transcriptional regulator of asparagine biosynthesis (AsnC family); Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.774 |
lrp-2 | gltB | PSHAa2263 | PSHAb0127 | Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.409 |
lrp-2 | putA | PSHAa2263 | PSHAa2264 | Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.744 |
putA | gltB | PSHAa2264 | PSHAb0127 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.936 |
putA | lrp-2 | PSHAa2264 | PSHAa2263 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.744 |