Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa2268Putative Fimh-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (171 aa)    
Predicted Functional Partners:
PSHAa2269
Putative orphan protein; No homology to any previously reported sequences.
 
     0.944
PSHAa2270
Putative orphan protein; No homology to any previously reported sequences.
       0.579
PSHAa2271
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.538
PSHAa2267
Putative ATPase and membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
    0.484
PSHAa2266
Homologs of previously reported genes of unknown function; membrane component.
  
    0.479
PSHAa2683
Homologs of previously reported genes of unknown function.
 
  
 0.458
rsxA
Electron transport complex protein rnfA, inner membrane protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
   
    0.444
PSHAa0654
Homologs of previously reported genes of unknown function.
 
 
 
 0.426
PSHAa0052
Hypothetical tryptophan-rich sensor protein; Function of strongly homologous gene; receptor.
 
 
 
 0.423
PSHAa0492
Homologs of previously reported genes of unknown function.
  
   
 0.411
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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