STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2271Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (229 aa)    
Predicted Functional Partners:
PSHAa2270
Putative orphan protein; No homology to any previously reported sequences.
       0.867
PSHAa2272
Homologs of previously reported genes of unknown function; membrane component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.759
PSHAa2273
Putative acrB/acrD/acrF acriflavin resistance family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.759
PSHAa2269
Putative orphan protein; No homology to any previously reported sequences.
       0.708
msrAB
protein-methionine-S-oxide reductase (Peptide Met(O) reductase); Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.663
PSHAa2268
Putative Fimh-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.538
PSHAa0465
Homologs of previously reported genes of unknown function.
       0.495
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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