STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2329Putative orphan protein; No homology to any previously reported sequences. (822 aa)    
Predicted Functional Partners:
PSHAa2328
Homologs of previously reported genes of unknown function.
 
   
 0.975
PSHAa2327
Homologs of previously reported genes of unknown function.
 
   
 0.974
PSHAa1983
Homologs of previously reported genes of unknown function.
  
 
 0.823
PSHAa1061
Homologs of previously reported genes of unknown function; regulator.
  
     0.720
purL
Phophoribosylformylglycinamidine synthase (FGAM synthetase); Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
       0.717
PSHAa0591
Putative complement resistance protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.558
PSHAa0435
Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
     0.521
PSHAa0627
Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.440
ccmD
Heme exporter protein D (Cytochrome c-type biogenesis protein ccmD); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
 
     0.431
PSHAa0058
Putative integral inner membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.422
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.