Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
motB-2Sodium-driven polar flagellar protein; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (306 aa)    
Predicted Functional Partners:
motA
Flagellar motor component (Chemotaxis motA protein); Function of homologous gene experimentally demonstrated in an other organism; membrane component.
 
 0.999
PSHAa0814
Putative Chemotaxis motA protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
 0.989
motY
Putative Component of sodium-driven polar flagellar motor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
  
 
 0.942
motB
Putative chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
  
 
0.926
flgK
Putative flagellar hook-associated; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.901
cheA
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
 0.894
cheV
Chemotaxis protein; Function of strongly homologous gene; regulator.
 
  
 0.885
flgC
Flagellar biosynthesis; Function of strongly homologous gene; structural protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.881
fliG
Flagellar biosynthesis; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.862
flgM
Putative negative regulator of flagellin synthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 
  
 0.855
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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