STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2385Putative HIT family hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (133 aa)    
Predicted Functional Partners:
PSHAa2384
Homologs of previously reported genes of unknown function; membrane component.
 
     0.739
PSHAa2082
Homologs of previously reported genes of unknown function.
 
 
    0.604
PSHAa2386
Dipeptidyl peptidase IV; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.595
PSHAa1326
Homologs of previously reported genes of unknown function.
  
  
 0.566
slyX
Homologs of previously reported genes of unknown function; Belongs to the SlyX family.
  
    0.478
yejH
Putative ATP-dependent helicase with nucleoside triP hydrolase domain; Function of strongly homologous gene; enzyme.
  
 
  0.425
rpoC
RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.407
PSHAa2387
Putative chemotaxis sensory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
   
   0.405
PSHAa2949
Putative sensor protein; Function of strongly homologous gene; receptor.
 
 
   0.404
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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