Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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PSHAa2407Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (688 aa)    
Predicted Functional Partners:
PSHAa2119
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.662
PSHAa2406
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.569
PSHAb0524
Putative TonB2 protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.569
PSHAa0528
Homologs of previously reported genes of unknown function; transporter.
 
   0.561
TonB2
TonB2 protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.549
PSHAb0254
Putative Outer membrane TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
     0.525
PSHAa2138
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.480
PSHAb0069
Putative membrane protein with TonB domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
 
 0.474
PSHAa2962
Homologs of previously reported genes of unknown function.
  
     0.461
PSHAb0232
Putative TonB dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
  
 0.455
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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