STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2420Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (164 aa)    
Predicted Functional Partners:
PSHAa2528
Ubiquinol-cytochrome c reductase, cytochrome c1; Function of homologous gene experimentally demonstrated in an other organism; carrier.
  
     0.751
PSHAa2752
Cytochrome c4; Function of homologous gene experimentally demonstrated in an other organism; carrier.
  
     0.686
PSHAa2530
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.676
PSHAa1663
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.673
PSHAa2529
Ubiquinol-cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.652
hslR
Heat shock protein 15, DNA/RNA-binding; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the HSP15 family.
  
    0.631
PSHAa2607
Homologs of previously reported genes of unknown function.
  
     0.587
PSHAa1846
Homologs of previously reported genes of unknown function.
  
     0.511
PSHAa2760
Cytochrome c5; Function of homologous gene experimentally demonstrated in an other organism; carrier.
  
     0.506
PSHAa1343
Putative oxoacyl-(acyl carrier protein) reductase with NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.499
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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