STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2482Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. (288 aa)    
Predicted Functional Partners:
PSHAa2483
Putative glycerophosphodiester phosphodiesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.820
PSHAa2484
Putative Bacterial chemotaxis sensory transducer; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
       0.786
PSHAa0039
Conserved protein of unknown function, putative integral inner membrane protein; Homologs of previously reported genes of unknown function; membrane component.
  
     0.504
queG
Conserved protein of unknown function; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
       0.426
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.