Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa2522Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (625 aa)    
Predicted Functional Partners:
mrcA
Penicillin-binding protein 1A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 
 0.875
PSHAa2523
Homologs of previously reported genes of unknown function; Belongs to the UPF0102 family.
  
  
 0.867
PSHAa2524
Conserved protein of unknown function, highly conserved in gamma-proteobacteria; Homologs of previously reported genes of unknown function.
  
    0.835
ecfH
Homologs of previously reported genes of unknown function.
  
    0.812
rsmI
Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.735
zipA
Putative Cell division protein zipA homolog; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
   
 0.694
PSHAa0165
Homologs of previously reported genes of unknown function.
  
     0.623
mreD
Rod shape-determining protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
   
 0.572
PSHAa1906
Homologs of previously reported genes of unknown function.
  
     0.555
rsmJ
Conserved protein of unknown function; Specifically methylates the guanosine in position 1516 of 16S rRNA.
  
     0.528
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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