Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa2556Putative magnesium transporter; Acts as a magnesium transporter. (452 aa)    
Predicted Functional Partners:
npr
Putative phosphocarrier protein NPr (HPr-like), nitrogen-related; Function of strongly homologous gene; carrier.
     
 0.746
PSHAa2554
Conserved protein of unknown function; Displays ATPase and GTPase activities.
       0.695
ptsN
PTS family enzyme IIA; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.687
PSHAa2552
Putative protein Y involved in control of translation at low temperature; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
       0.651
rpoN
Sigma N (sigma 54) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.639
PSHAa2545
Putative Na:Ca transport protein (CacA family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
 
   0.635
lptC
Conserved protein of unknown function; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
       0.606
PSHAa2549
Homologs of previously reported genes of unknown function; transporter.
       0.606
PSHAa2550
Putative transport protein (ABC superfamily, atp-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.606
ksdD
D-arabinose 5-phosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.577
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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