Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PSHAa2571Homologs of previously reported genes of unknown function. (147 aa)    
Predicted Functional Partners:
recQ
ATP-dependent DNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.737
PSHAa2573
Putative orphan protein; No homology to any previously reported sequences.
       0.737
rarD
Homologs of previously reported genes of unknown function; transporter.
  
    0.675
folE
GTP cyclohydrolase I; Function of strongly homologous gene; enzyme.
      
 0.506
plsX
Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.455
ilvM
Acetolactate synthase II, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.436
PSHAa2574
Homologs of previously reported genes of unknown function.
       0.428
PSHAa1896
Homologs of previously reported genes of unknown function.
  
     0.417
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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