Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2622PhoH-like protein; Function of strongly homologous gene; 12867461. (465 aa)    
Predicted Functional Partners:
hepA
RNA polymerase associated protein (ATP-dependent helicase HepA); Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
  
    0.674
PSHAa2621
Putative Sensory box sensor histidine kinase/response regulator; Function of strongly homologous gene; receptor.
  
    0.616
PSHAa2620
Putative two-component response regulator; Function of strongly homologous gene; regulator.
       0.608
PSHAa1214
Conserved protein of unknown function, nucleotide triphosphate hydrolase domain; Homologs of previously reported genes of unknown function.
   
  
 0.527
PSHAa1213
Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family.
   
    0.506
PSHAa0506
Homologs of previously reported genes of unknown function.
  
     0.487
PSHAa1833
Homologs of previously reported genes of unknown function.
  
     0.479
PSHAa2623
Putative orphan protein; No homology to any previously reported sequences.
       0.464
PSHAa1212
Homologs of previously reported genes of unknown function.
   
    0.452
PSHAa0762
Homologs of previously reported genes of unknown function.
  
     0.448
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.