Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2626Homologs of previously reported genes of unknown function. (75 aa)    
Predicted Functional Partners:
PSHAa2625
Homologs of previously reported genes of unknown function.
 
 
 0.989
PSHAa1041
Homologs of previously reported genes of unknown function.
  
 
 0.783
kidB
Toxin of the toxin/antitoxin chromosome stabilisation protein; Function of strongly homologous gene; factor.
  
 
 0.783
PSHAb0168
Putative sirtuin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
   
    0.558
rluA
Pseudouridylate synthase for 23S rRNA (position 746) and tRNAphe(position 32), dual specificity; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.548
hutC
Histidine utilization repressor (GntR family); Function of homologous gene experimentally demonstrated in an other organism; regulator.
   
    0.513
PSHAa0674
Homologs of previously reported genes of unknown function; membrane component.
  
     0.456
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.