Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2677Homologs of previously reported genes of unknown function. (1283 aa)    
Predicted Functional Partners:
mreD
Rod shape-determining protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
 
     0.946
rng
RNase G (ribonuclease G); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.868
PSHAa2679
Conserved protein of unknown function with Maf/Ham1 domain; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.868
tldD
Putative suppressor of CsrA inhibitory activity; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.853
PSHAa2676
Putative hydrolase, carbon-nitrogen family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.813
mreC
Putative rod shape-determining protein (partial); Involved in formation and maintenance of cell shape.
       0.792
mreB
Rod shape-determining protein; Function of homologous gene experimentally demonstrated in an other organism; structural protein.
       0.792
PSHAa0389
Putative ampicillin resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.724
PSHAa2683
Homologs of previously reported genes of unknown function.
       0.695
smg
Homologs of previously reported genes of unknown function; Belongs to the Smg family.
  
     0.674
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.