Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mshQPutative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV); Function of strongly homologous gene; 11985966. (1246 aa)    
Predicted Functional Partners:
mshL
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV); Function of strongly homologous gene; 11985966.
 
  
 0.970
mshO
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshO (pilus type IV); Function of strongly homologous gene; 11985966.
 
   
 0.953
mshD
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
  
 0.951
mshJ
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
   
 0.945
mshA
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshA (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
   
 0.944
mshB
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshB (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
     0.925
PSHAb0200
Putative secreted serine protease, subtilisin family, possibly excreted; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the peptidase S8 family.
 
 
 0.918
PSHAa2699
MSHA biogenesis protein MshI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
     0.917
PSHAa2698
Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
     0.915
mshG
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV); Function of strongly homologous gene; structural protein.
 
   
 0.823
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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