Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mshPPutative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshP (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966. (166 aa)    
Predicted Functional Partners:
mshQ
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV); Function of strongly homologous gene; 11985966.
       0.806
mshO
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshO (pilus type IV); Function of strongly homologous gene; 11985966.
       0.806
mshD
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
       0.806
mshC
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshC (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
       0.802
mshA
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshA (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
       0.802
mshG
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV); Function of strongly homologous gene; structural protein.
     
 0.750
mshK
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshK (pilus type IV), lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
     
 0.737
mshM
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV); Function of strongly homologous gene; 11985966.
       0.733
mshL
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV); Function of strongly homologous gene; 11985966.
       0.733
PSHAa2698
Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
  
  
 0.732
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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