Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mshGPutative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV); Function of strongly homologous gene; structural protein. (406 aa)    
Predicted Functional Partners:
mshE
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV); Function of strongly homologous gene; 11985966.
 
 
 0.986
mshL
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV); Function of strongly homologous gene; 11985966.
 
  
 0.956
mshA
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshA (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
  
 0.936
exeE
General secretion pathway protein E (Type II traffic warden ATPase); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.928
pilB
Type IV pilus biogenesis protein PilB; Function of homologous gene experimentally demonstrated in an other organism.
 
 
 0.928
mshB
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshB (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
  
 0.922
PSHAa2698
Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
 
 
 0.917
mshJ
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
  
 0.911
mshD
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
 
  
 0.903
mshO
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshO (pilus type IV); Function of strongly homologous gene; 11985966.
 
  
 0.902
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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