STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcyDPutative D-cysteine desulfhydrase, PLP-dependent enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (302 aa)    
Predicted Functional Partners:
bkdA2
2-oxoisovalerate dehydrogenase E1 component beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
BckdhA
2-oxoisovalerate dehydrogenase E1 component alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
PSHAa2683
Homologs of previously reported genes of unknown function.
     
 0.723
mshL
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV); Function of strongly homologous gene; 11985966.
       0.583
mshJ
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
       0.559
PSHAa2698
Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
       0.559
mshG
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV); Function of strongly homologous gene; structural protein.
       0.554
mshE
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV); Function of strongly homologous gene; 11985966.
       0.554
mshM
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV); Function of strongly homologous gene; 11985966.
       0.554
PSHAa2699
MSHA biogenesis protein MshI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; 11985966.
       0.553
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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