Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa2702Cytochrome-c peroxidase; Function of strongly homologous gene; enzyme. (386 aa)    
Predicted Functional Partners:
PSHAa2703
Homologs of previously reported genes of unknown function.
 
    0.672
PSHAa2155
Putative protein W (OmpW) family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
   
  
 0.566
hemN
Coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.563
PSHAa1845
Putative cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
  
 0.562
PSHAa2704
Homologs of previously reported genes of unknown function.
  
    0.545
PSHAa2701
Protein with EAL domain; Function of homologous gene experimentally demonstrated in an other organism.
  
    0.518
sodB
Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  
 0.494
PSHAa1843
Putative Cbb3-type cytochrome oxidase, cytochrome c subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
   
  
 0.431
PSHAa1865
Putative cytochrome C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
  
  
 0.428
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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