STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eptALipid A phosphoethanolamine transferase, associated with polymyxin resistance; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (558 aa)    
Predicted Functional Partners:
mdoB
Putative phosphoglycerol transferase; Function of strongly homologous gene; enzyme.
 
   
 0.853
dgkA
Putative diacylglycerol kinase (DAGK); Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
   
 0.837
cusS
Putative sensor transduction kinase (copper resistance); Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
   
 0.700
cusR
Two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
      0.622
PSHAa2777
Homologs of previously reported genes of unknown function.
       0.474
corC
Magnesium and cobalt efflux protein corC; Function of strongly homologous gene; transporter.
      
 0.470
cvpA
Membrane protein required for colicin V production; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
      
 0.470
PSHAb0446
Putative hemolysin III; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
      
 0.470
PSHAa1818
Homologs of previously reported genes of unknown function; Belongs to the UPF0352 family.
  
     0.458
ampD
N-acetyl-anhydromuramyl-L-alanine amidase; Function of strongly homologous gene; enzyme.
     
 0.427
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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