Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
asnCTranscriptional regulator of asparagine biosynthesis (AsnC family); Function of homologous gene experimentally demonstrated in an other organism; regulator. (152 aa)    
Predicted Functional Partners:
lrp-2
Leucine-responsive regulatory protein; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
     0.774
asnA
Asparagine synthetase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.745
recG
ATP-dependent DNA helicase recG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
 0.713
PSHAb0429
Putative transcriptional regulator, AsnC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
  
     0.692
trmH
Putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase); Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.657
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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