Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PSHAa2824Homologs of previously reported genes of unknown function. (225 aa)    
Predicted Functional Partners:
PSHAa2457
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
     0.689
PSHAa1142
Homologs of previously reported genes of unknown function.
  
     0.688
PSHAa1352
Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
     0.653
glnL
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL; Function of homologous gene experimentally demonstrated in an other organism; regulator.
   
    0.590
PSHAa2823
Putative orphan protein; No homology to any previously reported sequences.
       0.568
PSHAa1353
Homologs of previously reported genes of unknown function.
  
     0.555
PSHAa0437
Putative tonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
     0.552
PSHAb0043
Putative uncharacterized iron-regulated membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.518
PSHAa0139
Homologs of previously reported genes of unknown function.
  
     0.513
PSHAa2972
Homologs of previously reported genes of unknown function.
  
     0.475
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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