Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2848Alpha-glucosidase; Function of strongly homologous gene; enzyme. (680 aa)    
Predicted Functional Partners:
PSHAb0209
Putative carbohydrate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.920
PSHAa1351
Alpha-glucosidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.918
PSHAa1357
Putative alpha-amylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
    
 0.903
PSHAa1355
Putative glycosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
   
 0.768
PSHAa1356
Putative sugar transporter; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
 
     0.741
PSHAa1363
Putative transcriptional regulator, LacI family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
     0.673
PSHAa1354
Putative alpha-amylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 13 family.
 
   
 0.633
PSHAa1353
Homologs of previously reported genes of unknown function.
  
     0.589
PSHAa1352
Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
     0.513
PSHAa1584
Putative TonB-dependent receptor for ferrichrome transport; Function of homologous gene experimentally demonstrated in an other organism; receptor.
  
     0.501
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.