Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2855Homologs of previously reported genes of unknown function. (288 aa)    
Predicted Functional Partners:
PSHAa2856
Homologs of previously reported genes of unknown function.
       0.807
PSHAa1994
Putative orphan protein; No homology to any previously reported sequences.
  
     0.679
PSHAa0251
Putative orphan protein; No homology to any previously reported sequences.
  
     0.649
bioH
Putative enzyme in pimeloyl-CoA (biotin precursor) synthesis with alpha/beta-hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.601
PSHAa1210
Putative response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
     0.593
cheV
Chemotaxis protein; Function of strongly homologous gene; regulator.
  
    0.539
PSHAa0762
Homologs of previously reported genes of unknown function.
  
     0.533
PSHAa0820
Homologs of previously reported genes of unknown function.
  
     0.502
PSHAa0817
Homologs of previously reported genes of unknown function.
  
     0.488
PSHAa2858
Homologs of previously reported genes of unknown function.
       0.479
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.