Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PSHAa2598 | cbpA | PSHAa2598 | PSHAa2878 | Putative RNA methyltransferase with a deep trefoil knot, RrmA and YibK are structural paralogs; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | 0.408 |
| PSHAa2598 | endA | PSHAa2598 | PSHAa2879 | Putative RNA methyltransferase with a deep trefoil knot, RrmA and YibK are structural paralogs; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.683 |
| PSHAa2877 | cbpA | PSHAa2877 | PSHAa2878 | Homologs of previously reported genes of unknown function. | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | 0.995 |
| PSHAa2877 | endA | PSHAa2877 | PSHAa2879 | Homologs of previously reported genes of unknown function. | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.523 |
| cbpA | PSHAa2598 | PSHAa2878 | PSHAa2598 | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | Putative RNA methyltransferase with a deep trefoil knot, RrmA and YibK are structural paralogs; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.408 |
| cbpA | PSHAa2877 | PSHAa2878 | PSHAa2877 | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | Homologs of previously reported genes of unknown function. | 0.995 |
| cbpA | endA | PSHAa2878 | PSHAa2879 | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.441 |
| cbpA | sdaC | PSHAa2878 | PSHAa0200 | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | Putative serine transport protein (HAAAP family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | 0.421 |
| endA | PSHAa2598 | PSHAa2879 | PSHAa2598 | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative RNA methyltransferase with a deep trefoil knot, RrmA and YibK are structural paralogs; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.683 |
| endA | PSHAa2877 | PSHAa2879 | PSHAa2877 | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Homologs of previously reported genes of unknown function. | 0.523 |
| endA | cbpA | PSHAa2879 | PSHAa2878 | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | 0.441 |
| endA | sdaC | PSHAa2879 | PSHAa0200 | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative serine transport protein (HAAAP family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | 0.433 |
| sdaC | cbpA | PSHAa0200 | PSHAa2878 | Putative serine transport protein (HAAAP family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | Curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family); Function of strongly homologous gene; molecular chaperone. | 0.421 |
| sdaC | endA | PSHAa0200 | PSHAa2879 | Putative serine transport protein (HAAAP family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | Endonuclease I Precursor (Endo I); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.433 |