Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmpNitric oxide dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the globin family. (393 aa)    
Predicted Functional Partners:
PSHAa2881
Putative integral inner membrane permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
  
 0.953
PSHAa2882
Putative orphan protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.798
PSHAa2419
Homologs of previously reported genes of unknown function.
 
   
 0.791
norR
Transcriptional regulator of anaerobic NO reduction and detoxification (EBP family); Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.787
PSHAa2451
Homologs of previously reported genes of unknown function.
  
  
 0.664
PSHAa1893
Putative Sigma-54 dependent transcriptional regulator/sensory box protein; Function of strongly homologous gene; regulator.
     
 0.597
msrC
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.594
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.581
wcaJ
UDP-glucose lipid carrier transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.576
gltB
Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.576
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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