Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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tatCTwin-arginine translocase subunit, sec-independent protein export; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (246 aa)    
Predicted Functional Partners:
tatA
Twin-arginine translocase subunit, sec-independent protein export; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
 0.999
PSHAa2930
Sec-independent protein translocase protein TatB; Function of strongly homologous gene; transporter.
 
 
 0.998
tatD
Putative metal-dependent hydrolase, possibly deoxyribonuclease, TatD family; Function of strongly homologous gene; enzyme.
     
 0.981
PSHAa2932
Homologs of previously reported genes of unknown function.
  
  
 0.887
copA
Copper resistance protein A (CPx-type copper ATPase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 
 0.832
mdoG
Periplasmic glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
  
 
 0.824
hemB
5-aminolevulinate dehydratase (porphobilinogen synthase); Function of strongly homologous gene; enzyme; Belongs to the ALAD family.
       0.806
PSHAa2934
Homologs of previously reported genes of unknown function.
       0.773
ubiB
2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
  
  
 0.766
PSHAa2927
Putative protein with ubiquinone carrier domain, SCP-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
    0.747
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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