STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa2986Putative ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (1079 aa)    
Predicted Functional Partners:
PSHAa2988
Homologs of previously reported genes of unknown function.
 
     0.953
PSHAa2989
Homologs of previously reported genes of unknown function.
 
     0.946
PSHAa2987
Putative orphan protein; No homology to any previously reported sequences.
       0.798
PSHAa2984
Homologs of previously reported genes of unknown function.
       0.787
PSHAa2985
Homologs of previously reported genes of unknown function.
       0.787
infB
Protein chain initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.545
PSHAa0623
Homologs of previously reported genes of unknown function.
  
     0.515
rhlE-2
DEAD-box protein family; Function of strongly homologous gene; factor; Belongs to the DEAD box helicase family.
       0.449
PSHAa2990
Homologs of previously reported genes of unknown function.
       0.432
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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