Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa2987Putative orphan protein; No homology to any previously reported sequences. (320 aa)    
Predicted Functional Partners:
PSHAa2988
Homologs of previously reported genes of unknown function.
       0.800
PSHAa2986
Putative ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.798
PSHAa2989
Homologs of previously reported genes of unknown function.
       0.787
PSHAa2984
Homologs of previously reported genes of unknown function.
       0.773
PSHAa2985
Homologs of previously reported genes of unknown function.
       0.773
rhlE-2
DEAD-box protein family; Function of strongly homologous gene; factor; Belongs to the DEAD box helicase family.
       0.449
PSHAa2990
Homologs of previously reported genes of unknown function.
       0.406
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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