Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
copBCopper resistance protein B [Precursor] (CPx-type copper ATPase); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (291 aa)    
Predicted Functional Partners:
copA
Copper resistance protein A (CPx-type copper ATPase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.998
cusS-2
Sensor protein; Member of a two-component regulatory system.
 
   
 0.880
PSHAb0006
Putative metal-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
   
 0.870
PSHAb0008
Putative copper export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
 
   
 0.825
PSHAb0009
Putative copper resistance (CopC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
   
 0.825
PSHAa1477
Probable nitrite reductase (EC 1.7.99.3); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the multicopper oxidase family.
  
  
 0.801
cusR-2
Transcriptional activator of copper resistance (two-component regulatory system with CusS); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.748
PSHAb0007
Putative orphan protein; No homology to any previously reported sequences.
     
 0.696
cheA
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
      
 0.649
PSHAa0575
Putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
 
  
 0.598
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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