STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVPutative Hemin ABC transport system ATP-binding protein hmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (261 aa)    
Predicted Functional Partners:
hmuT
Putative Hemin-binding periplasmic ABC-transport system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.999
hmuU
Hemin ABC-transport system permease; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
PSHAa2565
Putative Iron-compound ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.990
hmuS
Putative hemin transport protein hmuS; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.984
hmuR
Putative Hemin receptor protein HmuR; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
  
 0.856
PSHAa2562
Putative ABC transporter, periplasmic substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
  
 0.732
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
      0.713
PSHAb0069
Putative membrane protein with TonB domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
   
 0.674
PSHAb0071
Putative biopolymer transport protein, ExbD/TolR domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
     
 0.597
PSHAb0070
Putative biopolymer transport protein, MotA/TolQ/ExbB proton channel domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
     
 0.561
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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