STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAb0292Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (420 aa)    
Predicted Functional Partners:
ogt
Putative Methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
     
 0.787
PSHAb0076
Homologs of previously reported genes of unknown function.
  
     0.726
PSHAb0026
Putative transposase IS200-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.715
PSHAa0582
Putative transposase (IS605); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.696
PSHAa0581
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
     0.686
PSHAb0027
Peyer's patch-specific virulence factor GipA (transposase); Function of homologous gene experimentally demonstrated in an other organism; factor.
  
     0.684
PSHAa0341
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
  
     0.682
tdk
Thymidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.536
PSHAb0291
Putative ADA regulatory protein (Regulatory protein of adaptative response); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.482
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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