Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAb0372Putative lipoprotein, possibly associated with the outermembrane; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (470 aa)    
Predicted Functional Partners:
PSHAb0370
Putative lipoprotein component of a efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; ; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.960
PSHAb0371
Similar to AcrAB-TolC efflux pump; Function of strongly homologous gene; membrane component.
 
 0.953
acrE
Putative lipoprotein component of efflux protein (exporter); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.839
acrB
Putative multidrug efflux pump (RND family); Function of strongly homologous gene; transporter.
 
 0.802
PSHAa0558
Putative outer membrane transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.775
PSHAb0373
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.762
PSHAa0559
Putative Secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.691
PSHAb0369
Putative transcriptional regulator with periplasmic binding domain (LysR family, YafC, YeaT); Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.664
PSHAa1078
Putative secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.662
PSHAb0036
Putative efflux pump or secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
 
 
 0.643
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.