STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAb0401Histidine ammonia-lyase (hutT-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (514 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase (Urocanase, imidazolonepropionate hydrolase); Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.990
PSHAb0403
Putative orphan protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.943
PSHAb0402
Putative protein with predicted thioesterase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
    0.941
hutI
Imidazolonepropionase (imidazolone-5-propionate hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.940
PSHAb0404
Putative membrane protein, Predicted exporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
     0.927
PSHAb0395
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
     0.924
hutH
Histidine ammonia-lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 
0.923
PSHAb0396
Putative AMP-dependent synthetase and ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.922
hisD
Bifunctional HisD: L-histidinal:NAD+ dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.918
PSHAb0408
Putative 3-hydroxylacyl-(acyl carrier protein) dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.916
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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